Aliases : PUB13, ATPUB13
Description : not classified & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g002810 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g082530 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g13264 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene36180.t1 | Aspi01Gene36180 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0068.g036326 | No alias | not classified & original description: CDS=1-918 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g03737 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31463 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.35G012000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre03.g178550 | No alias | Dynein assembly factor with WDR repeat domains 1... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g09044 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04978 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023893001 | PUB15 | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Len_g09306 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_3998208g0010 | PUB13, ATPUB13 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g10832 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g09615 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g06298 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo181353 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g096460.2.1 | Solyc01g096460 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g066040.2.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Tin_g21993 | PUB13, ATPUB13 | E3 ubiquiTin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
No external refs found! |