Zm00001d037232 (GRMZM2G048836)

Aliases : GRMZM2G048836

Description : 29.5.7 protein.degradation.metalloprotease Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. FTSH protease 6 (FTSH6)

Gene families : OG_01_0000396 (Gene family) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d037232
Cluster HCCA cluster: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT5G15250 ATFTSH6, FTSH6 FTSH protease 6 0.09 Gene family
GSVIVT01011397001 No alias 29.5.7 protein.degradation.metalloprotease Encodes an... 0.07 Gene family
GSVIVT01024791001 No alias 29.5.7 protein.degradation.metalloprotease encodes an... 0.02 Gene family
Solyc02g081550.3.1 Solyc02g081550.3 29.5.7 protein.degradation.metalloprotease Encodes an... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006508 proteolysis IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 264 396
IPR000642 Peptidase_M41 478 666
No external refs found!