AMTR_s00092p00144240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00092.113

Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG_01_0001111 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001111_tree ,
OG_02_0001701 (LandPlants) Phylogenetic Tree(s): OG_02_0001701_tree ,
OG_03_0001587 (SeedPlants) Phylogenetic Tree(s): OG_03_0001587_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00092p00144240
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
LOC_Os06g51490.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_91656g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c21_10100V3.1 No alias JUMONJI 14 0.02 Archaeplastida
Solyc02g069740.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.03 Archaeplastida
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 LandPlants
Pp3c16_4220V3.1 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.01 LandPlants
Solyc02g069740.4.1 No alias no hits & (original description: none) 0.03 LandPlants
GSVIVT01023517001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 SeedPlants
Solyc02g069740.4.1 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e030938_P001 No alias histone demethylase (PKDM7). transcription factor (JUMONJI) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003888 FYrich_N 929 979
IPR003347 JmjC_dom 388 504
IPR003349 JmjN 143 176
IPR004198 Znf_C5HC2 611 663
IPR003889 FYrich_C 984 1064
No external refs found!