Ore_g21141


Description : not classified & original description: none


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g21141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00104550 evm_27.TU.AmTr_v1... Protein OBERON 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G63500 No alias Protein of unknown function (DUF1423) 0.02 OrthoFinder output from all 47 species
Adi_g026102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087399 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Adi_g098683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04884 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00660.t1 OBE1, Aspi01Gene00660 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72655.t1 OBE1, Aspi01Gene72655 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0097.g043818 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Cba_g20827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62905 OBE2 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dac_g20877 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Dde_g02398 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Dde_g24942 No alias transcriptional co-regulator *(Oberon) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02961 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g07963 No alias transcriptional co-regulator *(Oberon) & original... 0.06 OrthoFinder output from all 47 species
LOC_Os12g32980.1 OBE2, LOC_Os12g32980 OBERON-like protein OS=Nicotiana benthamiana... 0.03 OrthoFinder output from all 47 species
Len_g09574 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
MA_10294074g0010 No alias no description available(sp|q10pc5|tta1_orysj : 312.0) 0.04 OrthoFinder output from all 47 species
Pnu_g23031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c27_7360V3.1 Pp3c27_7360 No annotation 0.02 OrthoFinder output from all 47 species
Ppi_g08472 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002299 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Sam_g07945 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Sam_g36511 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g087490.4.1 Solyc01g087490 Protein OBERON 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g01081 OBE2 transcriptional co-regulator *(Oberon) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!