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  5. Ore_g20376

Ore_g20376 (LPA1)


Aliases : LPA1

Description : protein involved in PS-II assembly *(LPA1) & original description: none


Gene families : OG0007503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007503_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20376

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00200960 LPA1,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT1G02910 LPA1 tetratricopeptide repeat (TPR)-containing protein 0.06 OrthoFinder output from all 47 species
Aev_g09161 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Als_g14081 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g07881 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0301.g063734 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z061600.1 LPA1, Ceric.1Z061600 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Cre10.g430150 No alias Photosynthesis.photophosphorylation.photosystem... 0.01 OrthoFinder output from all 47 species
Dcu_g02841 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.1 OrthoFinder output from all 47 species
Ehy_g15605 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01027972001 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
LOC_Os01g25600.1 LPA1, LOC_Os01g25600 LPA1 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
Len_g00549 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03930 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
MA_10428940g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_8804338g0010 LPA1 Protein LOW PSII ACCUMULATION 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Pnu_g08072 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.07 OrthoFinder output from all 47 species
Ppi_g33137 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017935 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g14405 No alias protein involved in PS-II assembly *(LPA1) & original... 0.02 OrthoFinder output from all 47 species
Sam_g50149 No alias protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Smo134250 LPA1 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Spa_g09685 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g06564 LPA1 protein involved in PS-II assembly *(LPA1) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e017629_P003 LPA1, Zm00001e017629 LPA1 protein involved in PS-II assembly 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021883 LPA1-like 211 287
No external refs found!