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  5. Ore_g20307

Ore_g20307 (emb1441)


Aliases : emb1441

Description : component *(RQC2) of Ribosome-associated Quality Control (RQC) complex & original description: none


Gene families : OG0003708 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003708_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20307
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Smo266749 emb1441 No description available 0.03 OrthoFinder output from all 47 species
Solyc01g057850.4.1 emb1441, Solyc01g057850 component RQC2 of Ribosome-associated Quality Control... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008532 NFACT_RNA-bd 550 661
IPR021846 NFACT-C 1037 1128
IPR001878 Znf_CCHC 976 990
No external refs found!