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  5. Ore_g20233

Ore_g20233


Description : mTERF-type transcription factor & original description: none


Gene families : OG0000165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g20233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00114980 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
AMTR_s00126p00036560 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.02 OrthoFinder output from all 47 species
Aev_g48506 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06519 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.50 No alias RNA biosynthesis.organelle... 0.01 OrthoFinder output from all 47 species
Dcu_g02967 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06040 EMB2219 mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13193 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03684 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Gb_15878 No alias transcription factor (mTERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33460.2 LOC_Os05g33460 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os06g12080.1 LOC_Os06g12080 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
LOC_Os11g10000.1 LOC_Os11g10000 transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_10427666g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_81581g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
MA_92135g0010 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Mp3g14990.1 No alias transcription factor (mTERF) 0.02 OrthoFinder output from all 47 species
Spa_g04981 No alias mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11413 No alias mTERF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003690 MTERF 514 610
IPR003690 MTERF 260 399
IPR003690 MTERF 67 226
No external refs found!