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  5. Aev_g16422

Aev_g16422 (QRT3)


Aliases : QRT3

Description : polygalacturonase *(QRT3) & original description: none


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g16422
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Ceric.15G061400.1 QRT3, Ceric.15G061400 polygalacturonase *(QRT3) & original description:... 0.03 OrthoFinder output from all 47 species
GSVIVT01012138001 No alias Cell wall.pectin.modification and... 0.01 OrthoFinder output from all 47 species
GSVIVT01029528001 QRT3 Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
MA_10425986g0010 QRT3 polygalacturonase (QRT3) 0.02 OrthoFinder output from all 47 species
MA_739517g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g068410.3.1 Solyc02g068410 polygalacturonase (QRT3) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR024535 Pectate_lyase_SF_prot 110 341
No external refs found!