1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g19065

Ore_g19065


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g19065
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138570 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00113430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g18485... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g047975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g27648 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06301 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07498 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30592 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19060 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41640 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16691 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g24180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07836.t1 REME1, Aspi01Gene07836 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18019.t1 Aspi01Gene18019 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35154.t1 Aspi01Gene35154 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67429.t1 Aspi01Gene67429 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010319 No alias not classified & original description: CDS=1-1401 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012689 No alias not classified & original description: CDS=1-2352 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025886 No alias not classified & original description: CDS=1-2634 0.02 OrthoFinder output from all 47 species
Azfi_s0115.g046284 No alias not classified & original description: CDS=76-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060212 CRR22 not classified & original description: CDS=1-2343 0.04 OrthoFinder output from all 47 species
Azfi_s0676.g081825 No alias not classified & original description: CDS=1-2163 0.02 OrthoFinder output from all 47 species
Cba_g04693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G067400.1 Ceric.11G067400 not classified & original description: pacid=50595438... 0.02 OrthoFinder output from all 47 species
Ceric.20G003600.1 Ceric.20G003600 not classified & original description: pacid=50567008... 0.02 OrthoFinder output from all 47 species
Dac_g02864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03777 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g15083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23318 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21497 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43321 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06754 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g37552 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49828 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23295 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
LOC_Os11g29230.1 CRR22, LOC_Os11g29230 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Len_g05304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25458 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07804 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g11487 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24627 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g28215 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34247 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g41204 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g45004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22972 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04990 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32476 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g43020 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g58489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15155 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25475 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05062 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61267 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007831 No alias not classified & original description: CDS=364-1791 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0086.g018405 No alias not classified & original description: CDS=1-2268 0.04 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Smo130420 No alias Pentatricopeptide repeat-containing protein At4g19191,... 0.03 OrthoFinder output from all 47 species
Smo442088 CRR22 Pentatricopeptide repeat-containing protein At2g33760... 0.02 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Spa_g29172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17746 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23085 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26745 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 221
IPR046848 E_motif 341 393
IPR002885 Pentatricopeptide_repeat 22 67
IPR002885 Pentatricopeptide_repeat 123 169
IPR002885 Pentatricopeptide_repeat 224 271
No external refs found!