Ore_g19023

Description : not classified & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g19023
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
Aev_g19093	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g20050	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g25187	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08007	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49142.t1	Aspi01Gene49142	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene59345.t1	Aspi01Gene59345	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene59350.t1	Aspi01Gene59350	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G008900.1	Ceric.03G008900	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Dac_g07534	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g11068	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g15161	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35272	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09802	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01013838001	No alias	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Len_g29036	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g19430.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp3g01170.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Mp5g03920.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp5g03930.1	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Nbi_g03614	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g05557	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g26065	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29702	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g01612	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g14779	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g49578	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004807	triose-phosphate isomerase activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007264	small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0007265	Ras protein signal transduction	IEP	HCCA
BP	GO:0007266	Rho protein signal transduction	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	1	101

External Links

No external refs found!

Ore_g19023

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation