Ore_g18949

Description : not classified & original description: none

Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g18949

Target	Alias	Description	ECC score	Gene Family Method
Adi_g055518	CRK8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115167	ORF111A	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g39859	CRK8	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene03259.t1	ORF240B, Aspi01Gene03259	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12103.t1	Aspi01Gene12103	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene18112.t1	CRK8, Aspi01Gene18112	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28820.t1	CRK8, Aspi01Gene28820	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52915.t1	Aspi01Gene52915	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene66339.t1	CRK8, Aspi01Gene66339	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g77341	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dac_g01799	CRK8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g32187	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g60633	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g09982	CRK8	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	241	337
IPR025724	GAG-pre-integrase_dom	173	223
IPR013103	RVT_2	581	657

External Links

No external refs found!

Ore_g18949

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation