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  5. Ore_g18750

Ore_g18750


Description : translation elongation factor *(EF-P) & original description: none


Gene families : OG0006339 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18750

Target Alias Description ECC score Gene Family Method Actions
AT3G08740 No alias elongation factor P (EF-P) family protein 0.05 OrthoFinder output from all 47 species
Als_g20082 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Aob_g02958 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene26427.t2 Aspi01Gene26427 translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0359.g066840 No alias translation elongation factor *(EF-P) & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000404.33 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dde_g00267 No alias translation elongation factor *(EF-P) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g00568 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01030181001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os11g02450.1 LOC_Os11g02450 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species
LOC_Os12g02380.1 LOC_Os12g02380 EF-P translation elongation factor 0.02 OrthoFinder output from all 47 species
Len_g01053 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Mp4g02120.1 No alias EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species
Nbi_g06931 No alias translation elongation factor *(EF-P) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g31705 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Sam_g14867 No alias translation elongation factor *(EF-P) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039313_P003 Zm00001e039313 EF-P translation elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEA Interproscan
BP GO:0006414 translational elongation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR015365 Elong-fact-P_C 178 233
IPR001059 Transl_elong_P/YeiP_cen 120 170
IPR013185 Transl_elong_KOW-like 52 109
No external refs found!