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  5. Ore_g18520

Ore_g18520 (EMB16, EMB2036, AKRP)


Aliases : EMB16, EMB2036, AKRP

Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18520
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ala_g13350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G110600.1 Ceric.02G110600 not classified & original description: pacid=50584977... 0.04 OrthoFinder output from all 47 species
Dac_g36507 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g50367 EMB16, EMB2036, AKRP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g14600.1 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g00869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g41339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011451 No alias not classified & original description: CDS=16-1155 0.02 OrthoFinder output from all 47 species
Sam_g11677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g061820.4.1 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.06 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32282 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0042586 peptide deformylase activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 255 295
IPR002110 Ankyrin_rpt 302 380
No external refs found!