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  5. Ore_g18148

Ore_g18148 (CP24, LHCB6)


Aliases : CP24, LHCB6

Description : component *(LHCb6) of LHC-II complex & original description: none


Gene families : OG0003880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g18148
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268360 CP24, LHCB6,... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT1G15820 CP24, LHCB6 light harvesting complex photosystem II subunit 6 0.03 OrthoFinder output from all 47 species
Adi_g050814 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g084972 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04130 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36777.t1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07812 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G051300.1 CP24, LHCB6,... component *(LHCb6) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Dac_g26480 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02505 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05483 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Gb_27633 CP24, LHCB6 component LHCb6 of LHC-II complex 0.05 OrthoFinder output from all 47 species
LOC_Os04g38410.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.04 OrthoFinder output from all 47 species
Len_g18838 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Mp6g01650.1 CP24, LHCB6 component LHCb6 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Msp_g11766 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66467 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14091 No alias component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g105030.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.06 OrthoFinder output from all 47 species
Solyc01g105050.3.1 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.06 OrthoFinder output from all 47 species
Spa_g48848 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05852 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21610 CP24, LHCB6 component *(LHCb6) of LHC-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006561_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.03 OrthoFinder output from all 47 species
Zm00001e041918_P001 CP24, LHCB6,... component LHCb6 of LHC-II complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0008883 glutamyl-tRNA reductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 114 251
No external refs found!