Description : protein.degradation.ubiquitin.proteasom Encodes beta subunit of 20s proteosome complex which is involved in protein degradation. 20S proteasome beta subunit C2 (PBC2)

Gene families : OG_01_0002888 (Gene family) Phylogenetic Tree(s): OG0002888_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d036756
Cluster HCCA cluster: Cluster_344

Target Alias Description ECC score Gene Family Method Actions
AT1G21720 PBC1 proteasome beta subunit C1 0.03 Gene family
Cpa|evm.model.tig00000826.22 No alias protein.degradation.ubiquitin.proteasom 20S... 0.01 Gene family
Cre06.g267500 No alias protein.degradation.ubiquitin.proteasom 20S... 0.03 Gene family
GSVIVT01008836001 No alias protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family
LOC_Os02g08520 Os02g0182500 protein.degradation.ubiquitin.proteasom 20S... 0.02 Gene family
LOC_Os06g43570 Os06g0643100 protein.degradation.ubiquitin.proteasom 20S... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 7 97
No external refs found!