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  5. Ore_g17711

Ore_g17711 (APE1)


Aliases : APE1

Description : photosynthetic acclimation APE acclimation factor & original description: none


Gene families : OG0005042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17711

Target Alias Description ECC score Gene Family Method Actions
AT5G38660 APE1 acclimation of photosynthesis to environment 0.06 OrthoFinder output from all 47 species
Adi_g042602 APE1 photosynthetic acclimation APE acclimation factor &... 0.09 OrthoFinder output from all 47 species
Aev_g05820 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Ala_g01434 APE1 photosynthetic acclimation APE acclimation factor &... 0.08 OrthoFinder output from all 47 species
Als_g04161 APE1 photosynthetic acclimation APE acclimation factor &... 0.08 OrthoFinder output from all 47 species
Aob_g11675 APE1 photosynthetic acclimation APE acclimation factor &... 0.1 OrthoFinder output from all 47 species
Aop_g00474 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene37157.t1 APE1, Aspi01Gene37157 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Azfi_s0022.g016149 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Cba_g36758 APE1 photosynthetic acclimation APE acclimation factor &... 0.09 OrthoFinder output from all 47 species
Ceric.36G020000.1 APE1, Ceric.36G020000 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.155 APE1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Cre16.g665250 APE1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g08395 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Dcu_g15090 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Dde_g12570 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Ehy_g07374 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
GSVIVT01036442001 APE1 Photosynthesis.photophosphorylation.photosystem... 0.07 OrthoFinder output from all 47 species
Gb_11215 APE1 photosynthetic acclimation APE acclimation factor 0.09 OrthoFinder output from all 47 species
LOC_Os08g27010.1 APE1, LOC_Os08g27010 photosynthetic acclimation APE acclimation factor 0.08 OrthoFinder output from all 47 species
Len_g00377 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Lfl_g00668 APE1 photosynthetic acclimation APE acclimation factor &... 0.08 OrthoFinder output from all 47 species
Mp1g12820.1 APE1 photosynthetic acclimation APE acclimation factor 0.06 OrthoFinder output from all 47 species
Msp_g00353 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Nbi_g30376 APE1 photosynthetic acclimation APE acclimation factor &... 0.08 OrthoFinder output from all 47 species
Pir_g12433 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Pir_g59760 APE1 photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g12820 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Pp3c4_3720V3.1 APE1, Pp3c4_3720 acclimation of photosynthesis to environment 0.02 OrthoFinder output from all 47 species
Ppi_g32168 APE1 photosynthetic acclimation APE acclimation factor &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0071.g016876 APE1 photosynthetic acclimation APE acclimation factor &... 0.04 OrthoFinder output from all 47 species
Sam_g16456 No alias photosynthetic acclimation APE acclimation factor &... 0.03 OrthoFinder output from all 47 species
Smo117112 APE1 Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
Solyc03g034170.4.1 APE1, Solyc03g034170 photosynthetic acclimation APE acclimation factor 0.07 OrthoFinder output from all 47 species
Spa_g11785 APE1 photosynthetic acclimation APE acclimation factor &... 0.07 OrthoFinder output from all 47 species
Tin_g12102 APE1 photosynthetic acclimation APE acclimation factor &... 0.05 OrthoFinder output from all 47 species
Zm00001e004293_P003 APE1, Zm00001e004293 photosynthetic acclimation APE acclimation factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:0140673 transcription elongation-coupled chromatin remodeling IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021275 DUF2854 98 248
No external refs found!