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  5. Ore_g17404

Ore_g17404


Description : not classified & original description: none


Gene families : OG0001047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17404

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00099p00056810 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AMTR_s00169p00047130 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G33680 No alias KH domain-containing protein 0.04 OrthoFinder output from all 47 species
AT2G25970 No alias KH domain-containing protein 0.04 OrthoFinder output from all 47 species
AT5G50940 No alias RNA-binding KH domain-containing protein 0.01 OrthoFinder output from all 47 species
Adi_g077319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105498 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g12253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02435 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g09504 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g13995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08444 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g02902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33846.t1 Aspi01Gene33846 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69176.t1 Aspi01Gene69176 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008730 No alias not classified & original description: CDS=100-2877 0.04 OrthoFinder output from all 47 species
Cba_g72516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g72682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027700.1 Ceric.03G027700 not classified & original description: pacid=50573278... 0.06 OrthoFinder output from all 47 species
Ceric.20G036400.1 Ceric.20G036400 not classified & original description: pacid=50567078... 0.06 OrthoFinder output from all 47 species
Cre06.g250800 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g09113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10230 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02873 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03956 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g06078 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g23014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035354001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01036378001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_04922 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g13130.1 LOC_Os02g13130 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01930.1 LOC_Os08g01930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g24459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59778 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g02045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10434164g0020 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_13061g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g07780.1 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g19307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10281 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000424 No alias not classified & original description: CDS=117-1961 0.03 OrthoFinder output from all 47 species
Sam_g18640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g040370.2.1 Solyc11g040370 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc12g095960.3.1 Solyc12g095960 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g07318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e014452_P001 Zm00001e014452 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e021868_P005 Zm00001e021868 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024927_P001 Zm00001e024927 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e029163_P001 Zm00001e029163 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 209 275
IPR004088 KH_dom_type_1 120 184
No external refs found!