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Description : SMARCI component *(BRD) of SWI/SNF chromatin remodeling complex & original description: none
Gene families : OG0001292 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001292_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g17328 | |
| Cluster | HCCA: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g07673 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0368.g067016 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g06181 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species | |
| Mp3g15890.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g11339 | No alias | SMARCI component *(BRD) of SWI/SNF chromatin remodeling... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | HCCA |
| BP | GO:0016311 | dephosphorylation | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001487 | Bromodomain | 274 | 355 |
| No external refs found! |