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  5. Ore_g17022

Ore_g17022 (TGD2)


Aliases : TGD2

Description : substrate binding component *(TGD2) of TGD lipid importer complex & original description: none


Gene families : OG0002728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002728_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g17022

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00204440 TGD2,... Lipid metabolism.lipid transport.plastidial lipid... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24491.t1 TGD2, Aspi01Gene24491 substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Aspi01Gene67421.t1 TGD2, Aspi01Gene67421 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Cba_g09155 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Ceric.17G036300.1 TGD2, Ceric.17G036300 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Ceric.21G037400.1 TGD2, Ceric.21G037400 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
Dde_g02786 TGD2 substrate binding component *(TGD2) of TGD lipid... 0.03 OrthoFinder output from all 47 species
GSVIVT01010853001 TGD2 Lipid metabolism.lipid transport.plastidial lipid... 0.04 OrthoFinder output from all 47 species
Sam_g17696 No alias substrate binding component *(TGD2) of TGD lipid... 0.02 OrthoFinder output from all 47 species
Zm00001e018496_P001 TGD2, Zm00001e018496 substrate binding component TGD2 of TGD lipid importer complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR003399 Mce/MlaD 101 176
No external refs found!