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  5. Ore_g16802

Ore_g16802 (AGO5)


Aliases : AGO5

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16802
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00069070 AGO7, ZIP,... Chromatin organisation.DNA methylation.canonical... 0.03 OrthoFinder output from all 47 species
AT1G31290 AGO3 ARGONAUTE 3 0.03 OrthoFinder output from all 47 species
Aev_g10073 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Aob_g11125 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23299.t1 AGO7, ZIP,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28463.t1 AGO1, Aspi01Gene28463 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Dde_g37805 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dde_g50313 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ehy_g06133 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
GSVIVT01012490001 AGO7, ZIP Protein argonaute 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g33650.1 AGO7, ZIP, LOC_Os03g33650 Protein argonaute 7 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58600.1 AGO5, LOC_Os03g58600 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.02 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_123150g0010 AGO7, ZIP siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 OrthoFinder output from all 47 species
Msp_g03218 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Msp_g43146 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05462 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Pir_g10918 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Pir_g15671 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.04 OrthoFinder output from all 47 species
Pir_g66376 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Pp3c17_350V3.1 AGO1, Pp3c17_350 Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.01 OrthoFinder output from all 47 species
Ppi_g14534 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009460 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009481 AGO1 not classified & original description: CDS=370-3495 0.02 OrthoFinder output from all 47 species
Solyc01g010970.3.1 AGO7, ZIP, Solyc01g010970 Protein argonaute 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g23108 AGO9 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Tin_g17474 AGO1 miRNA recruiTing factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Tin_g18796 AGO1 miRNA recruiTing factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Zm00001e016179_P001 PNH, AGO10, ZLL,... Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003165 Piwi 55 355
No external refs found!