1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g16770

Ore_g16770


Description : circadian clock factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16770
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G18330 EPR1, RVE7 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g05996 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46995 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50879.t1 Aspi01Gene50879 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26311 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0048.g013571 RVE1 transcription factor *(REVEILLE) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014166 RVE2, CIR1 transcription factor *(REVEILLE) & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008418 protein-N-terminal asparagine amidohydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 63 108
No external refs found!