Ore_g16725

Description : small GTPase *(Sar1) & original description: none

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ore_g16725

Target	Alias	Description	ECC score	Gene Family Method
Ala_g11143	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.31G032100.1	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description:...	0.02	OrthoFinder output from all 47 species
Cre11.g468300	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.01	OrthoFinder output from all 47 species
GSVIVT01028107001	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.04	OrthoFinder output from all 47 species
Mp2g15910.1	SAR2, ATSARA1C,...	GTPase (Sar1)	0.04	OrthoFinder output from all 47 species
Msp_g03392	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g07520	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g08457	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Smo179259	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.03	OrthoFinder output from all 47 species
Spa_g24853	No alias	small GTPase *(Sar1) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g30673	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017591_P001	SAR2, ATSARA1C,...	GTPase (Sar1)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006672	ceramide metabolic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	1	154

External Links

No external refs found!