Description : assembly factor involved in RuBisCo assembly *(RbcX) & original description: none
Gene families : OG0005102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ore_g16545 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aob_g01138 | No alias | assembly factor involved in RuBisCo assembly *(RbcX) &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g04377 | No alias | assembly factor involved in RuBisCo assembly *(RbcX) &... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46091 | No alias | assembly factor involved in RuBisCo assembly *(RbcX) &... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032095001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02160 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g59320.1 | LOC_Os03g59320 | RbcX assembly factor involved in RuBisCo assembly | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os07g38230.1 | LOC_Os07g38230 | RbcX assembly factor involved in RuBisCo assembly | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g05877 | No alias | assembly factor involved in RuBisCo assembly *(RbcX) &... | 0.05 | OrthoFinder output from all 47 species | |
Mp1g26500.1 | No alias | RbcX assembly factor involved in RuBisCo assembly | 0.02 | OrthoFinder output from all 47 species | |
Pp3c12_1270V3.1 | Pp3c12_1270 | Chaperonin-like RbcX protein | 0.01 | OrthoFinder output from all 47 species | |
Spa_g13070 | No alias | assembly factor involved in RuBisCo assembly *(RbcX) &... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e011815_P001 | Zm00001e011815 | RbcX assembly factor involved in RuBisCo assembly | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0044183 | protein folding chaperone | IEA | Interproscan |
BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003435 | Chaperonin_RcbX | 94 | 195 |
No external refs found! |