Zm00001d036593 (GRMZM2G089640)


Aliases : GRMZM2G089640

Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. auxin response factor 6 (ARF6)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d036593
Cluster HCCA cluster: Cluster_210

Target Alias Description ECC score Gene Family Method Actions
AT1G19850 MP, IAA24, ARF5 Transcriptional factor B3 family protein /... 0.03 Gene family
AT2G28350 ARF10 auxin response factor 10 0.03 Gene family
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.02 Gene family
AT4G23980 ARF9 auxin response factor 9 0.03 Gene family
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.02 Gene family
GSVIVT01032251001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os01g70270 Os01g0927600 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os02g06910 Os02g0164900 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.05 Gene family
LOC_Os05g48870 Os05g0563400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
LOC_Os06g48950 Os06g0702600 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_92651g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc00g188857.1.1 Solyc00g188857.1 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc01g096070.3.1 Solyc01g096070.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Solyc02g077560.3.1 Solyc02g077560.3 No description available 0.02 Gene family
Solyc04g081235.1.1 Solyc04g081235.1 No description available 0.02 Gene family
Solyc07g042260.3.1 Solyc07g042260.3 No description available 0.02 Gene family
Zm00001d014013 GRMZM2G159399 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014377 GRMZM2G035405 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014507 GRMZM2G013663 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d026687 GRMZM2G023813 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d041056 GRMZM2G352159 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010525 Auxin_resp 309 392
IPR003340 B3_DNA-bd 183 284
IPR033389 AUX/IAA_dom 824 913
No external refs found!