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  5. Ore_g16500

Ore_g16500


Description : not classified & original description: none


Gene families : OG0004514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004514_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16500

Target Alias Description ECC score Gene Family Method Actions
Adi_g021973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061095 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g103922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36774 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g23803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G083000.1 Ceric.29G083000 not classified & original description: pacid=50625581... 0.05 OrthoFinder output from all 47 species
Dcu_g01969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027630001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g03560.1 LOC_Os03g03560 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g02312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g091500.3.1 Solyc01g091500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 113 195
No external refs found!