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  5. Ore_g16481

Ore_g16481


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16481

Target Alias Description ECC score Gene Family Method Actions
Adi_g025859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g08629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0214.g058333 No alias not classified & original description: CDS=705-1877 0.04 OrthoFinder output from all 47 species
Azfi_s0226.g058986 No alias not classified & original description: CDS=214-2052 0.03 OrthoFinder output from all 47 species
Cba_g17498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G051600.1 Ceric.01G051600 not classified & original description: pacid=50592490... 0.03 OrthoFinder output from all 47 species
Ceric.27G020300.1 Ceric.27G020300 not classified & original description: pacid=50605628... 0.02 OrthoFinder output from all 47 species
Ceric.31G061400.1 Ceric.31G061400 not classified & original description: pacid=50575101... 0.03 OrthoFinder output from all 47 species
Ceric.39G011900.1 Ceric.39G011900 not classified & original description: pacid=50583491... 0.03 OrthoFinder output from all 47 species
Cre16.g662702 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g12970 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23949 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g16482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02255 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06999 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g090910.3.1 Solyc02g090910 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g16749 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22004 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 12 69
IPR000504 RRM_dom 669 723
IPR000504 RRM_dom 101 158
No external refs found!