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  5. Ore_g16342

Ore_g16342


Description : not classified & original description: none


Gene families : OG0001992 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001992_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16342
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Adi_g109854 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G076500.1 Ceric.21G076500 not classified & original description: pacid=50604105... 0.04 OrthoFinder output from all 47 species
Dcu_g07743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10889 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_40983 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g09762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06803 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29177 ATSGS3, SGS3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g066990.2.1 Solyc11g066990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039004_P001 Zm00001e039004 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0031047 RNA-mediated gene silencing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP HCCA
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005380 XS_domain 732 865
No external refs found!