1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g16241

Ore_g16241 (RPL9)


Aliases : RPL9

Description : component *(bL9c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005681_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16241
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AT3G44890 RPL9 ribosomal protein L9 0.04 OrthoFinder output from all 47 species
Aev_g02007 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ala_g14560 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Als_g00418 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Aob_g29870 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aop_g01961 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aspi01Gene08814.t1 RPL9, Aspi01Gene08814 component *(bL9c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Azfi_s0116.g046443 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Cba_g11053 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.04G054000.1 RPL9, Ceric.04G054000 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.04G054200.1 RPL9, Ceric.04G054200 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre12.g556050 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dac_g04533 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dcu_g00712 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dde_g03177 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g02133 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01031460001 RPL9 Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Gb_34312 RPL9 component psRPL9 of large ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Len_g18180 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_810522g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_8767694g0010 RPL9 component psRPL9 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Mp1g05730.1 RPL9 component psRPL9 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Msp_g21781 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Pnu_g10443 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pp3c1_5320V3.1 RPL9, Pp3c1_5320 ribosomal protein L9 0.01 OrthoFinder output from all 47 species
Ppi_g00398 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008686 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Sam_g39483 No alias component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Spa_g05781 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Spa_g26242 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Tin_g00502 RPL9 component *(bL9c) of large plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Zm00001e016155_P002 RPL9, Zm00001e016155 component psRPL9 of large ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020070 Ribosomal_L9_N 50 94
IPR020069 Ribosomal_L9_C 111 194
No external refs found!