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  5. Ore_g16152

Ore_g16152


Description : not classified & original description: none


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g16152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G40340 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060541 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113339 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G099500.1 Ceric.04G099500 not classified & original description: pacid=50631612... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000403.15 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.39 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g38810.1 LOC_Os05g38810 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g20479 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g24154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03857 No alias N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.02 OrthoFinder output from all 47 species
Nbi_g14266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001848 No alias not classified & original description: CDS=1-3909 0.02 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g086750.3.1 Solyc02g086750 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g31146 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027258_P002 Zm00001e027258 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e031849_P002 Zm00001e031849 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 487 571
No external refs found!