1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g15914

Ore_g15914


Description : not classified & original description: none


Gene families : OG0008173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008173_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15914
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT5G21060 No alias Glyceraldehyde-3-phosphate dehydrogenase-like family protein 0.03 OrthoFinder output from all 47 species
Aop_g12825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_03928 No alias Bifunctional aspartokinase/homoserine dehydrogenase 1,... 0.03 OrthoFinder output from all 47 species
Spa_g54119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050661 NADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001342 HDH_cat 252 396
IPR001342 HDH_cat 182 236
IPR005106 Asp/hSer_DH_NAD-bd 19 168
No external refs found!