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  5. Ore_g15538

Ore_g15538


Description : DNA polymerase lambda *(POLL) & original description: none


Gene families : OG0003218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15538
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00121830 evm_27.TU.AmTr_v1... DNA damage response.DNA repair polymerase activities.DNA... 0.03 OrthoFinder output from all 47 species
Gb_11445 No alias DNA polymerase lambda OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g31757 No alias DNA polymerase lambda *(POLL) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11520 No alias DNA polymerase lambda *(POLL) & original description: none 0.02 OrthoFinder output from all 47 species
Smo155063 No alias DNA damage response.DNA repair polymerase activities.DNA... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0034061 DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR029398 PolB_thumb 732 801
IPR010996 DNA_pol_b-like_N 476 541
IPR028207 DNA_pol_B_palm_palm 612 726
IPR018944 DNA_pol_lambd_fingers_domain 562 609
No external refs found!