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  5. Ore_g15512

Ore_g15512 (ATRNL, AtRLG1, RNL)


Aliases : ATRNL, AtRLG1, RNL

Description : multifunctional tRNA ligase *(RLG1) & original description: none


Gene families : OG0002159 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002159_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g15512
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Ceric.02G106200.1 ATRNL, AtRLG1,... multifunctional tRNA ligase *(RLG1) & original... 0.04 OrthoFinder output from all 47 species
MA_10426369g0010 ATRNL, AtRLG1, RNL tRNA ligase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_107545g0010 ATRNL, AtRLG1, RNL tRNA ligase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_202455g0010 ATRNL, AtRLG1, RNL no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g16314 No alias multifunctional tRNA ligase *(RLG1) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!