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  5. Ore_g14192

Ore_g14192 (AtRABA1f, RABA1f)


Aliases : AtRABA1f, RABA1f

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g14192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00100780 AtRABA5a,... Ras-related protein RABA5a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT5G60860 AtRABA1f, RABA1f RAB GTPase homolog A1F 0.04 OrthoFinder output from all 47 species
Adi_g035517 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081036 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17596 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03446 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36000 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33156.t1 AtRABA5d,... A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene69385.t1 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50243 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_14978 AtRABA5a, RABA5a A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Len_g02212 AtRABA5d, RABA5d not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28666 AtRABA5d, RABA5d not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18286 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
MA_113056g0010 AtRABA5a, RABA5a A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
MA_15386g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
MA_18685g0010 AtRABA5d, RABA5d A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Msp_g09974 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04704 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09438 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61287 ARA-1, ATRABA5E,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0224.g026297 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=308-952 0.03 OrthoFinder output from all 47 species
Zm00001e006210_P001 RABA2b,... A-class RAB GTPase 0.06 OrthoFinder output from all 47 species
Zm00001e009700_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e031368_P002 RAB-A2C,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e032148_P001 ATRABA1B, RAB11,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!