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  5. Ore_g13479

Ore_g13479


Description : transcription factor *(CLAUSA) & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13479

Target Alias Description ECC score Gene Family Method Actions
AT4G17695 KAN3 Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04915 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22341 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g47265 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33723.t1 Aspi01Gene33723 transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48429.t1 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene59741.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001571 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08285 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
MA_138039g0010 KAN2 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Msp_g12599 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31008 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g44491 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g06713 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g20359 KAN2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010896 No alias transcription factor *(CLAUSA) & original description: CDS=80-784 0.03 OrthoFinder output from all 47 species
Solyc02g076670.3.1 Solyc02g076670 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Zm00001e018018_P002 KAN4, ATS, Zm00001e018018 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e034056_P001 KAN, KAN1, Zm00001e034056 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!