Ore_g13277


Description : LSU processome maturation factor *(NSA2) & original description: none


Gene families : OG0003771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13277
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Adi_g013709 No alias LSU processome maturation factor *(NSA2) & original... 0.04 OrthoFinder output from all 47 species
Adi_g013710 No alias LSU processome maturation factor *(NSA2) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011153001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Lfl_g37110 No alias LSU processome maturation factor *(NSA2) & original... 0.02 OrthoFinder output from all 47 species
Pir_g00885 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32826 No alias LSU processome maturation factor *(NSA2) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32827 No alias LSU processome maturation factor *(NSA2) & original... 0.02 OrthoFinder output from all 47 species
Smo402189 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022309 Ribosomal_S8e/biogenesis_NSA2 30 253
No external refs found!