Ore_g13187


Description : not classified & original description: none


Gene families : OG0001185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001185_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g13187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00210200 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.05 OrthoFinder output from all 47 species
Adi_g019422 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Adi_g028535 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Adi_g112058 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Ala_g10884 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.06 OrthoFinder output from all 47 species
Ala_g11854 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Ala_g21890 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Als_g60779 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Aob_g04503 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Aop_g13602 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Aop_g22117 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Cba_g77134 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Ceric.04G047300.1 Ceric.04G047300 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.07 OrthoFinder output from all 47 species
Ceric.20G037600.1 Ceric.20G037600 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.05 OrthoFinder output from all 47 species
Ceric.39G023900.1 PCFS4, Ceric.39G023900 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000396.25 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000396.26 No alias RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.01 OrthoFinder output from all 47 species
Dcu_g09800 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.07 OrthoFinder output from all 47 species
Dde_g00986 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ehy_g07114 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Ehy_g18944 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Ehy_g32334 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
GSVIVT01012646001 PCFS4 RNA processing.RNA 3-end polyadenylation.Cleavage Factor... 0.03 OrthoFinder output from all 47 species
Gb_21315 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
Gb_26268 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.05 OrthoFinder output from all 47 species
LOC_Os08g08830.1 PCFS4, LOC_Os08g08830 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
LOC_Os09g39270.1 LOC_Os09g39270 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Len_g14750 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.02 OrthoFinder output from all 47 species
Len_g19078 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Lfl_g16594 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
MA_10040687g0010 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
MA_10433250g0020 PCFS4 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
MA_132868g0010 No alias component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species
Nbi_g08557 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Pnu_g26223 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015402 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Sam_g29724 No alias component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Solyc09g009120.4.1 Solyc09g009120 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.02 OrthoFinder output from all 47 species
Solyc10g083590.2.1 Solyc10g083590 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
Spa_g04862 PCFS4 component *(Pcf11) of Cleavage Factor II (CF-IIm)... 0.03 OrthoFinder output from all 47 species
Zm00001e021648_P002 PCFS4, Zm00001e021648 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.04 OrthoFinder output from all 47 species
Zm00001e033620_P001 Zm00001e033620 component Pcf11 of Cleavage Factor II (CF-IIm) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!