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  5. Ore_g11396

Ore_g11396


Description : not classified & original description: none


Gene families : OG0003211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g11396
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Ore_g01512 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05788 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g07313 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g09904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g11502 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12183 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g12236 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g13664 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g14621 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14982 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g15122 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ore_g15123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19725 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g22277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g24176 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g26449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26742 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g31335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32454 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g32984 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g35020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35022 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g36431 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Ore_g36433 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g36471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g36510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37066 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g38234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38235 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44909 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 119 134
No external refs found!