Description : component *(uL30) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0001142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00056p00107780 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00187310 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00086p00164400 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
AT2G01250 | No alias | Ribosomal protein L30/L7 family protein | 0.07 | OrthoFinder output from all 47 species | |
Adi_g099683 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g00722 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g30462 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g10797 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0129.g048841 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0870.g090589 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s4066.g117878 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.11G041100.1 | Ceric.11G041100 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G033800.1 | Ceric.34G033800 | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020909.42 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
Cre12.g537800 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g10886 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
Dcu_g00598 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g33812 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g35020 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g04672 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g06368 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g21688 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01029288001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01029651001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01029655001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
Gb_20650 | No alias | component RPL7 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g51630.1 | LOC_Os04g51630 | component RPL7 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os08g13690.1 | LOC_Os08g13690 | component RPL7 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g27660 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
MA_10428203g0010 | No alias | component RPL7 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
MA_109845g0010 | No alias | component RPL7 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
MA_47548g0010 | No alias | component RPL7 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Mp3g13040.1 | No alias | component RPL7 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
Msp_g04692 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g33450 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g11555 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g01037 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c1_39470V3.1 | Pp3c1_39470 | Ribosomal protein L30/L7 family protein | 0.05 | OrthoFinder output from all 47 species | |
Pp3c2_1610V3.1 | Pp3c2_1610 | Ribosomal protein L30/L7 family protein | 0.04 | OrthoFinder output from all 47 species | |
Pp3c2_5820V3.1 | Pp3c2_5820 | Ribosomal protein L30/L7 family protein | 0.05 | OrthoFinder output from all 47 species | |
Ppi_g23835 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g26101 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g06365 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g10126 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
Sam_g10127 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g13945 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g31082 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Smo103994 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g075090.4.1 | Solyc08g075090 | transcription factor (bHLH). component RPL7 of LSU... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g07368 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g21600 | No alias | component *(uL30) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003731_P002 | Zm00001e003731 | component RPL7 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007015_P002 | Zm00001e007015 | component RPL7 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e022294_P001 | Zm00001e022294 | component RPL7 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e040072_P002 | Zm00001e040072 | component RPL7 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e041593_P001 | Zm00001e041593 | component RPL7 of LSU proteome component | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005743 | mitochondrial inner membrane | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006848 | pyruvate transport | IEP | HCCA |
BP | GO:0006850 | mitochondrial pyruvate transmembrane transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015711 | organic anion transport | IEP | HCCA |
BP | GO:0015718 | monocarboxylic acid transport | IEP | HCCA |
BP | GO:0015849 | organic acid transport | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
CC | GO:0019866 | organelle inner membrane | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
CC | GO:0061617 | MICOS complex | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901475 | pyruvate transmembrane transport | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1903825 | organic acid transmembrane transport | IEP | HCCA |
BP | GO:1905039 | carboxylic acid transmembrane transport | IEP | HCCA |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |