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Description : Trihelix-type transcription factor & original description: none
Gene families : OG0003905 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003905_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g11177 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g02514 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g01060 | No alias | Trihelix-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g05847 | No alias | Trihelix-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g18426 | No alias | Trihelix-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g25671 | No alias | Trihelix-type transcription factor & original description: none | 0.14 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR044822 | Myb_DNA-bind_4 | 34 | 123 |
| No external refs found! |