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  5. Ore_g10952

Ore_g10952


Description : not classified & original description: none


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10952

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00210920 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00215650 NHL3,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00030p00216100 NHL10, YLS9,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT5G06320 NHL3 NDR1/HIN1-like 3 0.06 OrthoFinder output from all 47 species
AT5G36970 NHL25 NDR1/HIN1-like 25 0.02 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02808 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40012 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52160 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06323 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g08824 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25482 NHL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g41995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31068 NHL3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05236.t1 Aspi01Gene05236 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05239.t1 Aspi01Gene05239 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05256.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05257.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05258.t2 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05261.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05262.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05266.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05268.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05269.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07845.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20711 NHL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G004600.1 Ceric.03G004600 not classified & original description: pacid=50573018... 0.03 OrthoFinder output from all 47 species
Ceric.16G075400.1 Ceric.16G075400 not classified & original description: pacid=50589266... 0.03 OrthoFinder output from all 47 species
Ceric.29G002200.1 Ceric.29G002200 not classified & original description: pacid=50624873... 0.04 OrthoFinder output from all 47 species
Dac_g12219 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06112 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02072 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_01959 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_01970 NHL25 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_31759 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g59680.1 LOC_Os01g59680 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g64450.1 LOC_Os01g64450 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64480.1 LOC_Os01g64480 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g58850.1 NHL10, YLS9,... NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g11010.1 LOC_Os05g11010 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g16671 NHL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10432342g0020 NHL3 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_86810g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g35791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07369 NHL25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09290 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g42089 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06486 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09780 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g009160.2.1 Solyc01g009160 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g081980.2.1 NHL3, Solyc10g081980 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g56346 NHL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12739 NHL3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012610_P001 Zm00001e012610 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e019181_P001 NHL3, Zm00001e019181 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019498_P001 Zm00001e019498 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020501_P001 Zm00001e020501 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041974_P001 Zm00001e041974 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 130 223
No external refs found!