Ore_g10940


Description : component *(eIF3d) of eIF3 mRNA-to-PIC binding complex & original description: none


Gene families : OG0003519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003519_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10940
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00206060 evm_27.TU.AmTr_v1... Protein biosynthesis.translation... 0.04 OrthoFinder output from all 47 species
AT5G44320 No alias Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0.02 OrthoFinder output from all 47 species
Aop_g02560 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.05 OrthoFinder output from all 47 species
Ceric.05G054900.1 Ceric.05G054900 component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.3 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Cre05.g242300 No alias Protein biosynthesis.translation... 0.01 OrthoFinder output from all 47 species
Ehy_g09905 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01002790001 No alias Protein biosynthesis.translation... 0.02 OrthoFinder output from all 47 species
Gb_09895 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.02 OrthoFinder output from all 47 species
Gb_27994 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
MA_63764g0010 No alias component eIF3d of eIF3 mRNA-to-PIC binding complex 0.04 OrthoFinder output from all 47 species
Pnu_g13658 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.03 OrthoFinder output from all 47 species
Pp3c13_8400V3.1 Pp3c13_8400 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 0.01 OrthoFinder output from all 47 species
Sam_g17060 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species
Solyc02g078120.2.1 Solyc02g078120 component eIF3d of eIF3 mRNA-to-PIC binding complex 0.03 OrthoFinder output from all 47 species
Spa_g09748 No alias component *(eIF3d) of eIF3 mRNA-to-PIC binding complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007783 eIF3d 9 506
No external refs found!