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  5. Ore_g10217

Ore_g10217


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10217
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Adi_g024000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05618 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34416.t1 Aspi01Gene34416 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010769 No alias not classified & original description: CDS=270-1544 0.03 OrthoFinder output from all 47 species
Azfi_s1420.g102857 No alias not classified & original description: CDS=709-1824 0.03 OrthoFinder output from all 47 species
Ceric.01G051600.1 Ceric.01G051600 not classified & original description: pacid=50592490... 0.02 OrthoFinder output from all 47 species
Ceric.25G071400.1 Ceric.25G071400 not classified & original description: pacid=50593370... 0.03 OrthoFinder output from all 47 species
Ceric.27G020300.1 Ceric.27G020300 not classified & original description: pacid=50605628... 0.02 OrthoFinder output from all 47 species
Ceric.31G061400.1 Ceric.31G061400 not classified & original description: pacid=50575101... 0.04 OrthoFinder output from all 47 species
Dac_g14857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g15768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022126001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g12133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g26126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000825 No alias not classified & original description: CDS=373-1662 0.02 OrthoFinder output from all 47 species
Spa_g22004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028338_P001 Zm00001e028338 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 16 73
IPR000504 RRM_dom 355 409
IPR000504 RRM_dom 105 162
No external refs found!