Ore_g10194


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g10194

Target Alias Description ECC score Gene Family Method Actions
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g08301 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10756 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g04915 KAN, KAN1 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g38602 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene02998.t1 Aspi01Gene02998 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene19753.t1 Aspi01Gene19753 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35964.t1 Aspi01Gene35964 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g43219 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.13G021000.1 KAN, KAN1,... KANADI-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g05684 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g07770.1 APL, WDY, LOC_Os02g07770 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Nbi_g12621 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g11277 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g23688 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pnu_g10280 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc12g017370.3.1 APL, WDY, Solyc12g017370 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e007231_P002 Zm00001e007231 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e021698_P001 KAN2, Zm00001e021698 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e037731_P001 APL, WDY, Zm00001e037731 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 23 73
IPR025756 Myb_CC_LHEQLE 127 172
No external refs found!