Pp3c10_21170V3.1


Description : RNA binding Plectin/S10 domain-containing protein


Gene families : OG_01_0001849 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001849_tree ,
OG_02_0001692 (LandPlants) Phylogenetic Tree(s): OG_02_0001692_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_21170V3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
AMTR_s00017p00221160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
AT4G25740 No alias RNA binding Plectin/S10 domain-containing protein 0.14 Archaeplastida
AT5G41520 No alias RNA binding Plectin/S10 domain-containing protein 0.11 Archaeplastida
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.19 Archaeplastida
Cpa|evm.model.tig00001164.5 No alias 40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica 0.14 Archaeplastida
Cre09.g411100 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 Archaeplastida
GSVIVT01028854001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
Gb_10517 No alias component RPS10 of SSU proteome 0.08 Archaeplastida
LOC_Os01g73160.1 No alias component RPS10 of SSU proteome 0.12 Archaeplastida
LOC_Os02g34460.2 No alias component RPS10 of SSU proteome 0.02 Archaeplastida
LOC_Os04g35090.1 No alias component RPS10 of SSU proteome 0.15 Archaeplastida
MA_111018g0010 No alias component RPS10 of SSU proteome 0.08 Archaeplastida
MA_314020g0010 No alias component RPS10 of SSU proteome 0.09 Archaeplastida
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.15 Archaeplastida
Smo37555 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 Archaeplastida
Solyc01g099670.3.1 No alias component RPS10 of SSU proteome 0.17 Archaeplastida
Solyc12g096540.2.1 No alias component RPS10 of SSU proteome 0.14 Archaeplastida
Zm00001e008107_P001 No alias component RPS10 of SSU proteome 0.16 Archaeplastida
Zm00001e018554_P001 No alias No annotation 0.12 Archaeplastida
Zm00001e028280_P001 No alias component RPS10 of SSU proteome 0.15 Archaeplastida
Zm00001e040881_P001 No alias component RPS10 of SSU proteome 0.11 Archaeplastida
AMTR_s00001p00250710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 LandPlants
AMTR_s00017p00221160 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
AT4G25740 No alias RNA binding Plectin/S10 domain-containing protein 0.14 LandPlants
AT5G41520 No alias RNA binding Plectin/S10 domain-containing protein 0.1 LandPlants
AT5G52650 No alias RNA binding Plectin/S10 domain-containing protein 0.19 LandPlants
GSVIVT01019409001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 LandPlants
GSVIVT01028854001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 LandPlants
Gb_10517 No alias component RPS10 of SSU proteome 0.07 LandPlants
LOC_Os01g73160.1 No alias component RPS10 of SSU proteome 0.12 LandPlants
LOC_Os02g34460.2 No alias component RPS10 of SSU proteome 0.02 LandPlants
LOC_Os04g35090.1 No alias component RPS10 of SSU proteome 0.14 LandPlants
MA_111018g0010 No alias component RPS10 of SSU proteome 0.07 LandPlants
MA_314020g0010 No alias component RPS10 of SSU proteome 0.09 LandPlants
Mp2g00580.1 No alias component RPS10 of SSU proteome 0.15 LandPlants
Smo37555 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 LandPlants
Solyc01g099670.3.1 No alias component RPS10 of SSU proteome 0.16 LandPlants
Solyc12g096540.2.1 No alias component RPS10 of SSU proteome 0.14 LandPlants
Zm00001e008107_P001 No alias component RPS10 of SSU proteome 0.14 LandPlants
Zm00001e018554_P001 No alias No annotation 0.11 LandPlants
Zm00001e028280_P001 No alias component RPS10 of SSU proteome 0.13 LandPlants
Zm00001e040881_P001 No alias component RPS10 of SSU proteome 0.1 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005326 S10_plectin_N 3 94
No external refs found!