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  5. Ore_g09908

Ore_g09908


Description : not classified & original description: none


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g09908
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AT3G56680 No alias Single-stranded nucleic acid binding R3H protein 0.02 OrthoFinder output from all 47 species
AT5G05100 No alias Single-stranded nucleic acid binding R3H protein 0.02 OrthoFinder output from all 47 species
Adi_g007061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06097 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06651 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_34987 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g47803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12852 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g29372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020472 No alias not classified & original description: CDS=81-1199 0.04 OrthoFinder output from all 47 species
Sam_g17683 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc11g007110.2.1 Solyc11g007110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR024771 SUZ 196 246
IPR001374 R3H_dom 108 157
No external refs found!