1. Home
  2. Species
  3. Ophioglossum reticulatum
  4. Sequence
  5. Ore_g09687

Ore_g09687


Description : not classified & original description: none


Gene families : OG0007250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007250_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g09687

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00121540 evm_27.TU.AmTr_v1... PsbP domain-containing protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT3G56650 No alias Mog1/PsbP/DUF1795-like photosystem II reaction center... 0.06 OrthoFinder output from all 47 species
Adi_g015482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g00819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02884 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g13163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009335 No alias not classified & original description: CDS=1-810 0.04 OrthoFinder output from all 47 species
Ceric.39G037400.1 Ceric.39G037400 not classified & original description: pacid=50583235... 0.05 OrthoFinder output from all 47 species
Cre06.g280150 No alias PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g31306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00607 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00686 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025792001 No alias PsbP domain-containing protein 6, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os01g59090.1 LOC_Os01g59090 PsbP domain-containing protein 6, chloroplastic... 0.03 OrthoFinder output from all 47 species
Len_g07272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12167 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_478623g0010 No alias PsbP domain-containing protein 6, chloroplastic... 0.06 OrthoFinder output from all 47 species
Mp8g10770.1 No alias PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g47911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07469 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g65891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo144149 No alias PsbP domain-containing protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc06g065490.3.1 Solyc06g065490 PsbP domain-containing protein 6, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g17127 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21578 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e019532_P001 Zm00001e019532 PsbP domain-containing protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 108 264
No external refs found!