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  5. Ore_g09161

Ore_g09161 (PHR1, AtPHR1)


Aliases : PHR1, AtPHR1

Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g09161
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Adi_g006433 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Adi_g006724 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025473 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g11835 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g10988 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ala_g13064 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g01879 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g12175 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g12916 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g04252 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aob_g07352 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30442 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g05983 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g22498 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25096.t1 Aspi01Gene25096 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35964.t1 Aspi01Gene35964 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene35965.t1 Aspi01Gene35965 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene42025.t1 HRS1, Aspi01Gene42025 GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene45749.t1 Aspi01Gene45749 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59765.t1 Aspi01Gene59765 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64388.t1 Aspi01Gene64388 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g02748 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g17436 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g21970 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29468 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30049 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02992 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_201937g0010 APL, WDY G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
MA_6619111g0010 KAN, KAN1 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Msp_g24104 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g02075 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g19105 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29222 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g39083 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g55133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c23_8710V3.1 Pp3c23_8710 myb-like HTH transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
Ppi_g15588 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g22170 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ppi_g29510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g16091 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g51060 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g30427 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e033756_P003 Zm00001e033756 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 246 296
IPR025756 Myb_CC_LHEQLE 329 375
No external refs found!