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  5. Ore_g08945

Ore_g08945


Description : not classified & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g08945
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00209480 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00029790 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g80880,... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00238660 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g20300,... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00121040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00240990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g55630... 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00156340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g80550,... 0.03 OrthoFinder output from all 47 species
AMTR_s00078p00045650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g52640,... 0.04 OrthoFinder output from all 47 species
AMTR_s00105p00044870 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g71060,... 0.04 OrthoFinder output from all 47 species
AMTR_s00119p00029960 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g15010,... 0.08 OrthoFinder output from all 47 species
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.03 OrthoFinder output from all 47 species
AMTR_s00131p00098210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g13040,... 0.06 OrthoFinder output from all 47 species
AMTR_s00142p00073110 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g73400,... 0.06 OrthoFinder output from all 47 species
AT1G02420 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G20300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G71060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G73400 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G74900 OTP43 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G80880 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G60050 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G61360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62470 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G14820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G15010 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G18390 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G43820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G65820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g012989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g08644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01092 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15135 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12835 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.05 OrthoFinder output from all 47 species
Aob_g15608 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g17604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64236.t1 Aspi01Gene64236 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g10252 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23699 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.04 OrthoFinder output from all 47 species
Cba_g78360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G045100.1 Ceric.24G045100 not classified & original description: pacid=50628969... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000737.24 No alias No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.110 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g07022 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g07047 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g11222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03049 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g03918 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g04707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05532 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g06272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09971 No alias group-II intron mitochondrial splicing factor *(MISF68)... 0.04 OrthoFinder output from all 47 species
Dcu_g32634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g34156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39023 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01002056001 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.04 OrthoFinder output from all 47 species
GSVIVT01008815001 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.09 OrthoFinder output from all 47 species
GSVIVT01014289001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01015982001 No alias Pentatricopeptide repeat-containing protein At1g80880,... 0.07 OrthoFinder output from all 47 species
GSVIVT01017111001 No alias Pentatricopeptide repeat-containing protein At3g16010... 0.07 OrthoFinder output from all 47 species
GSVIVT01017293001 No alias Pentatricopeptide repeat-containing protein At1g52640,... 0.06 OrthoFinder output from all 47 species
GSVIVT01026360001 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.05 OrthoFinder output from all 47 species
GSVIVT01026463001 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.04 OrthoFinder output from all 47 species
GSVIVT01027388001 No alias Pentatricopeptide repeat-containing protein At1g80550,... 0.09 OrthoFinder output from all 47 species
GSVIVT01029740001 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Gb_08432 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.04 OrthoFinder output from all 47 species
Gb_11871 No alias Pentatricopeptide repeat-containing protein At3g49730... 0.08 OrthoFinder output from all 47 species
Gb_12874 No alias Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.05 OrthoFinder output from all 47 species
Gb_14768 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_19758 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.03 OrthoFinder output from all 47 species
Gb_20750 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.03 OrthoFinder output from all 47 species
Gb_23459 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.04 OrthoFinder output from all 47 species
Gb_32987 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.03 OrthoFinder output from all 47 species
Gb_41835 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g05860.1 LOC_Os01g05860 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os01g60010.1 LOC_Os01g60010 Pentatricopeptide repeat-containing protein At5g15010,... 0.04 OrthoFinder output from all 47 species
LOC_Os02g38950.1 LOC_Os02g38950 Pentatricopeptide repeat-containing protein At3g04130,... 0.02 OrthoFinder output from all 47 species
LOC_Os02g52220.1 LOC_Os02g52220 Pentatricopeptide repeat-containing protein At1g73400,... 0.05 OrthoFinder output from all 47 species
LOC_Os03g11020.1 LOC_Os03g11020 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os03g51840.1 LOC_Os03g51840 Pentatricopeptide repeat-containing protein At3g49730... 0.03 OrthoFinder output from all 47 species
LOC_Os03g55340.1 LOC_Os03g55340 Pentatricopeptide repeat-containing protein At1g77360,... 0.02 OrthoFinder output from all 47 species
LOC_Os04g55090.1 LOC_Os04g55090 Pentatricopeptide repeat-containing protein At1g80550,... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28180.1 LOC_Os08g28180 Pentatricopeptide repeat-containing protein At2g13420,... 0.07 OrthoFinder output from all 47 species
LOC_Os08g41380.1 LOC_Os08g41380 Pentatricopeptide repeat-containing protein At5g18390,... 0.04 OrthoFinder output from all 47 species
Len_g12106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432868g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_10433557g0010 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.03 OrthoFinder output from all 47 species
MA_12748g0020 No alias Pentatricopeptide repeat-containing protein At1g79540... 0.05 OrthoFinder output from all 47 species
MA_128052g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.04 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.06 OrthoFinder output from all 47 species
MA_38485g0010 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.03 OrthoFinder output from all 47 species
MA_39587g0010 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.04 OrthoFinder output from all 47 species
MA_8206159g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.08 OrthoFinder output from all 47 species
MA_845827g0010 No alias Pentatricopeptide repeat-containing protein At1g06710,... 0.04 OrthoFinder output from all 47 species
MA_933431g0010 No alias Pentatricopeptide repeat-containing protein At1g20300,... 0.07 OrthoFinder output from all 47 species
Mp4g20290.1 No alias Pentatricopeptide repeat-containing protein At3g06920... 0.02 OrthoFinder output from all 47 species
Msp_g08820 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38104 No alias splicing factor *(SLO3) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g27162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14416 PPR40 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29941 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g006850.1.1 Solyc01g006850 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc01g097130.4.1 Solyc01g097130 Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Solyc01g097730.4.1 Solyc01g097730 Pentatricopeptide repeat-containing protein At3g60050... 0.04 OrthoFinder output from all 47 species
Solyc03g116540.1.1 Solyc03g116540 Pentatricopeptide repeat-containing protein At1g52640,... 0.04 OrthoFinder output from all 47 species
Solyc03g117570.3.1 Solyc03g117570 Pentatricopeptide repeat-containing protein At1g80880,... 0.04 OrthoFinder output from all 47 species
Solyc04g071280.3.1 Solyc04g071280 Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
Solyc04g076370.4.1 Solyc04g076370 Pentatricopeptide repeat-containing protein At2g27800,... 0.03 OrthoFinder output from all 47 species
Solyc04g079150.1.1 Solyc04g079150 Pentatricopeptide repeat-containing protein At1g73400,... 0.03 OrthoFinder output from all 47 species
Solyc05g008330.3.1 Solyc05g008330 Pentatricopeptide repeat-containing protein At1g71060,... 0.03 OrthoFinder output from all 47 species
Solyc09g082390.3.1 Solyc09g082390 Pentatricopeptide repeat-containing protein At3g22670,... 0.04 OrthoFinder output from all 47 species
Solyc09g097840.2.1 Solyc09g097840 Pentatricopeptide repeat-containing protein At5g18390,... 0.05 OrthoFinder output from all 47 species
Solyc11g071670.2.1 Solyc11g071670 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Tin_g09961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005446_P003 Zm00001e005446 group-II intron mitochondrial splicing factor (MISF68) 0.07 OrthoFinder output from all 47 species
Zm00001e005758_P001 Zm00001e005758 Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
Zm00001e006773_P001 Zm00001e006773 Pentatricopeptide repeat-containing protein At1g80550,... 0.05 OrthoFinder output from all 47 species
Zm00001e013118_P001 Zm00001e013118 Pentatricopeptide repeat-containing protein At3g61360... 0.02 OrthoFinder output from all 47 species
Zm00001e025816_P001 Zm00001e025816 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e026896_P001 Zm00001e026896 Pentatricopeptide repeat-containing protein At3g62470,... 0.04 OrthoFinder output from all 47 species
Zm00001e028873_P001 Zm00001e028873 Pentatricopeptide repeat-containing protein At5g15010,... 0.04 OrthoFinder output from all 47 species
Zm00001e031478_P001 Zm00001e031478 Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Zm00001e036197_P001 Zm00001e036197 Pentatricopeptide repeat-containing protein At1g71060,... 0.05 OrthoFinder output from all 47 species
Zm00001e036305_P001 Zm00001e036305 Pentatricopeptide repeat-containing protein At3g25210,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 567 591
IPR002885 Pentatricopeptide_repeat 144 173
IPR002885 Pentatricopeptide_repeat 452 479
IPR002885 Pentatricopeptide_repeat 593 622
IPR002885 Pentatricopeptide_repeat 246 294
IPR002885 Pentatricopeptide_repeat 666 714
IPR002885 Pentatricopeptide_repeat 490 538
IPR002885 Pentatricopeptide_repeat 386 433
IPR002885 Pentatricopeptide_repeat 315 364
IPR002885 Pentatricopeptide_repeat 175 224
No external refs found!