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Aliases : NEF1
Description : exine patterning factor *(NEF1) & original description: none
Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ore_g08936 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00233120 | NEF1,... | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g087227 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cre01.g018050 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g04975 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001111001 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os11g32470.1 | NEF1, LOC_Os11g32470 | exine patterning factor (NEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g02354 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_302207g0010 | NEF1 | exine patterning factor (NEF1) | 0.04 | OrthoFinder output from all 47 species | |
| MA_7735973g0010 | NEF1 | exine patterning factor (NEF1) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g03573 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03839 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g10459 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo92814 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g033282.1.1 | NEF1, Solyc11g033282 | exine patterning factor (NEF1) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g15321 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| CC | GO:0000502 | proteasome complex | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003684 | damaged DNA binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005783 | endoplasmic reticulum | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006873 | cellular monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0008483 | transaminase activity | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019725 | cellular homeostasis | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| BP | GO:0030003 | cellular monoatomic cation homeostasis | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| BP | GO:0030163 | protein catabolic process | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| BP | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0042176 | regulation of protein catabolic process | IEP | HCCA |
| BP | GO:0042592 | homeostatic process | IEP | HCCA |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0048878 | chemical homeostasis | IEP | HCCA |
| BP | GO:0050801 | monoatomic ion homeostasis | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
| BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
| BP | GO:0055080 | monoatomic cation homeostasis | IEP | HCCA |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |