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  5. Ore_g08658

Ore_g08658


Description : not classified & original description: none


Gene families : OG0002016 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002016_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ore_g08658

Target Alias Description ECC score Gene Family Method Actions
Als_g06301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07964 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.02G039700.1 Ceric.02G039700 not classified & original description: pacid=50586014... 0.02 OrthoFinder output from all 47 species
Dcu_g12057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036119001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os10g06130.1 LOC_Os10g06130 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g03402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013261 No alias not classified & original description: CDS=1-1635 0.03 OrthoFinder output from all 47 species
Sam_g16814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g009220.3.1 Solyc10g009220 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g06606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g34275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021852_P001 Zm00001e021852 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 193 261
IPR000504 RRM_dom 99 161
IPR000504 RRM_dom 20 89
No external refs found!